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Making Tax Digital penalties

Reviewed by Sajid Aman BSc (Hons) FCA BFP · Updated · 4 min read

Missing an MTD submission earns one penalty point. At four points you are fined £200, and £200 again for every further miss. Points expire after 24 months of full compliance. Late payment penalties are separate: 3% of the unpaid tax at 15 days, another 3% at 30 days, then 10% annualised.

The points system

HMRC replaced automatic fines with points to avoid punishing a one-off slip. You get a point each time you miss a submission deadline, and you only pay once you reach the threshold.

For quarterly MTD filers the threshold is four points. Reach it and you pay £200. Every subsequent late submission is another £200, with no further points needed.

Submission frequencyPoints thresholdPenalty at threshold
Quarterly (MTD)4 points£200
Annual2 points£200

How points expire

Points expire individually after 24 months if you stay below the threshold. Once you have hit the threshold and been fined, you have to serve a full period of compliance: 12 months of submitting everything on time for quarterly filers, and have all outstanding submissions filed, before the slate is wiped.

Late payment penalties are separate

Being late to pay is treated entirely separately from being late to file.

How latePenalty
Up to 15 daysNo penalty if paid or a plan agreed
16 to 30 days3% of the tax outstanding at day 15
31 days or moreA further 3% of the tax outstanding at day 30
From day 31 onwardsAn additional 10% a year, accruing daily

Late payment interest runs on top of all of this, at the Bank of England base rate plus 4%.

This guide is general information, current at 9 November 2026. Tax rules change and depend on your circumstances. Please take advice before acting on it.

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Questions about this

What is the penalty for missing an MTD quarterly update?

One penalty point. No fine until you reach four points, at which stage you pay £200, and £200 for each further late submission.

Do MTD penalty points expire?

Yes, after 24 months, provided you have not hit the threshold. If you have been fined, you must complete 12 months of full compliance and file everything outstanding before points are cleared.

What is the penalty for paying tax late?

3% of the outstanding tax at day 15, a further 3% at day 30, then 10% a year accruing daily from day 31, plus interest at base rate plus 4%.

Can I appeal an MTD penalty?

Yes, if you have a reasonable excuse: serious illness, bereavement, a software or HMRC service failure. You appeal within 30 days of the penalty notice.

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